Inheritance diagram for model_data:
Private Member Functions | |
| ~model_data () | |
| model_data (int argc, char *argv[]) | |
Private Attributes | |
| init_adstring | datfilename |
| init_adstring | ctlfilename |
| data_int | readparfile |
| data_int | rundetail |
| data_int | reportdetail |
| data_int | N_nudata |
| data_int | Turn_off_phase |
| init_adstring | version_info |
| data_int | burn_intvl |
| data_int | thin_intvl |
| data_number | jitter |
| data_number | boundpush |
| data_int | Spb_sdrep_minyr |
| data_int | Spb_sdrep_maxyr |
| int | save_for_report |
| int | save_gparm |
| int | save_gparm_print |
| int | show_warning |
| int | mccounter |
| int | done_run |
| dvector | func_eval |
| dvector | func_conv |
| data_number | final_conv |
| data_int | retro_yr |
| data_int | fishery_on_off |
| data_number | F_ballpark |
| data_int | F_ballpark_yr |
| data_int | F_Method |
| data_int | Smry_Age |
| data_int | Do_Forecast |
| data_int | Do_MSY |
| data_int | Do_Rebuilder |
| data_int | Rebuild_Ydecl |
| data_int | Rebuild_Yinit |
| double | pi |
| double | NilNumbers |
| double | dummy_datum |
| int | dummy_phase |
| int | doreport3 |
| int | runnumber |
| int | N_prof_var |
| int | prof_var_cnt |
| data_vector | prof_var |
| data_int | styr |
| data_int | endyr |
| data_int | nseas |
| data_vector | seasdur |
| int | TimeMax |
| int | TimeMax_Fore |
| int | TimeMax_Fore_std |
| int | eq_yr |
| int | bio_yr |
| double | sumseas |
| data_int | spawn_seas |
| data_int | Nfleet |
| data_int | Nsurve |
| int | Ntypes |
| imatrix | pfleetname |
| init_adstring | fleetname |
| data_vector | surveytime |
| dvector | catchunits |
| data_int | gender |
| data_int | nages |
| ivector | age_vector |
| dvector | r_ages |
| ivector | years |
| data_vector | obs_equ_catch |
| data_matrix | catch_bioT |
| dmatrix | catch_ret_obs |
| ivector | have_catch |
| double | catch_ballpark |
| dmatrix | yr_cr2 |
| dmatrix | yr_disc2 |
| d3_array | yr_mnwt2 |
| d3_array | yr_l2 |
| d3_array | yr_a2 |
| d3_array | yr_ms2 |
| dmatrix | have_data |
| data_int | nobs |
| data_matrix | indexdata |
| ivector | nyr_cr |
| imatrix | yr_cr |
| imatrix | yr_cr_y |
| dmatrix | obs_cr |
| dmatrix | Ln_obs_cr |
| dmatrix | cv_cr |
| dmatrix | vul_bio |
| ivector | N_supyr_cr |
| imatrix | supyr_cr1 |
| imatrix | supyr_cr2 |
| data_int | disc_type |
| data_int | nobs_disc |
| data_matrix | discdata |
| ivector | nyr_disc |
| imatrix | yr_disc |
| imatrix | yr_disc_y |
| dmatrix | obs_disc |
| dmatrix | cv_disc |
| dmatrix | sd_disc |
| ivector | N_supyr_disc |
| imatrix | supyr_disc1 |
| imatrix | supyr_disc2 |
| data_int | nobs_mnwt |
| data_matrix | mnwtdata |
| data_number | min_tail |
| data_number | min_comp |
| data_int | nlength |
| int | nlength1 |
| int | nlength2 |
| data_vector | len_bins |
| dvector | len_bins2 |
| dvector | binwidth |
| dvector | len_bins_m |
| dvector | len_bins_m2 |
| dvector | len_bins_sq |
| dvector | male_offset |
| double | minL |
| double | maxL |
| double | minL2 |
| data_int | nobsl |
| data_matrix | lendata |
| ivector | nyr_l |
| double | temp |
| imatrix | yr_l |
| imatrix | yr_l_y |
| d3_array | obs_l |
| dmatrix | nsamp_l |
| dmatrix | nsamp_l_read |
| imatrix | gen_l |
| imatrix | mkt_l |
| d3_array | header_l |
| d3_array | tails_l |
| ivector | tails_w |
| ivector | N_supyr_l |
| imatrix | supyr_l1 |
| imatrix | supyr_l2 |
| int | floop |
| int | tloop |
| data_int | n_abins |
| int | n_abins1 |
| int | n_abins2 |
| data_vector | age_bins1 |
| data_int | N_ageerr |
| data_3array | age_err |
| d3_array | age_age |
| dvector | age_bins |
| data_int | nobsa |
| data_matrix | agedata |
| ivector | nyr_a |
| double | age |
| imatrix | yr_a |
| imatrix | yr_a_y |
| d3_array | obs_a |
| dmatrix | nsamp_a |
| dmatrix | nsamp_a_read |
| imatrix | ageerr_type_a |
| imatrix | gen_a |
| imatrix | mkt_a |
| d3_array | Lbin_filter |
| imatrix | use_Lbin_filter |
| imatrix | Lbin_lo |
| imatrix | Lbin_hi |
| d3_array | tails_a |
| d3_array | header_a |
| ivector | N_supyr_a |
| imatrix | supyr_a1 |
| imatrix | supyr_a2 |
| data_int | nobs_ms |
| data_matrix | sizeagedata |
| ivector | nyr_ms |
| imatrix | yr_ms |
| imatrix | yr_ms_y |
| d3_array | obs_ms |
| d3_array | obs_ms_n |
| d3_array | obs_ms_n_read |
| imatrix | ageerr_type_ms |
| imatrix | gen_ms |
| imatrix | mkt_ms |
| imatrix | use_ms |
| d3_array | header_ms |
| ivector | N_supyr_ms |
| imatrix | supyr_ms1 |
| imatrix | supyr_ms2 |
| data_int | N_envvar |
| data_int | N_envdata |
| dmatrix | env_data_RD |
| data_matrix | env_temp |
| data_int | fid |
| data_int | N_GP |
| data_int | N_GP2 |
| int | gmorph |
| int | gp |
| int | gp2 |
| int | birthseas |
| ivector | sx |
| ivector | GP |
| ivector | Bseas |
| ivector | GP2 |
| ivector | use_morph |
| imatrix | recr_dist_pattern_2 |
| ivector | shadow |
| dvector | azero_seas |
| dvector | azero_G |
| data_int | pop |
| data_ivector | fleet_area |
| data_3array | recr_dist_pattern |
| data_int | recr_dist_inx |
| data_int | do_migration |
| data_4array | move_pattern |
| int | N_move_parms |
| int | k1 |
| int | k2 |
| int | k3 |
| data_int | N_Block_Designs |
| data_ivector | Nblk |
| ivector | Nblk2 |
| data_imatrix | Block_Design |
| int | N_MGparm |
| data_number | fracfemale |
| data_number | sd_ratio |
| data_vector | submorphdist |
| data_number | natM_amin |
| data_number | natM_amax |
| data_number | AFIX |
| data_number | AFIX2 |
| data_number | SD_add_to_LAA |
| data_int | CV_depvar |
| int | CV_depvar_a |
| int | CV_depvar_b |
| data_int | Maturity_Option |
| data_int | First_Mature_Age |
| data_int | MGparm_def |
| data_int | MG_adjust_method |
| data_number | MGparm_dev_PH |
| ivector | time_vary_MG |
| ivector | MG_active |
| int | do_once |
| int | doit |
| dvector | femfrac |
| double | sd_withinmorph |
| double | sd_betweenmorph |
| int | MGP_CGD |
| int | CGD |
| data_matrix | MGparm_1 |
| data_matrix | Age_Maturity |
| data_matrix | Age_NatMort |
| int | N_MGparm_env |
| ivector | MGparm_env |
| int | N_MGparm_dev |
| data_int | customMGenvsetup |
| ivector | mgp_type |
| data_matrix | MGparm_env_1 |
| int | N_MGparm_blk |
| imatrix | Block_Defs_MG |
| data_int | customblocksetup_MG |
| data_matrix | MGparm_blk_1 |
| int | N_MGparm2 |
| dvector | MGparm_LO |
| dvector | MGparm_HI |
| dvector | MGparm_RD |
| dvector | MGparm_PR |
| ivector | MGparm_PRtype |
| dvector | MGparm_CV |
| ivector | MGparm_PH |
| ivector | MGparm_dev_minyr |
| ivector | MGparm_dev_maxyr |
| dvector | MGparm_dev_stddev |
| data_int | SR_fxn |
| data_matrix | SR_parm_1 |
| data_int | SR_env_link |
| data_int | SR_env_target_RD |
| int | SR_env_target |
| data_int | do_recr_dev |
| dvector | SRvec_LO |
| dvector | SRvec_HI |
| ivector | SRvec_PH |
| data_int | recdev_start |
| data_int | recdev_end |
| data_number | recdev_LO |
| data_number | recdev_HI |
| data_int | recdev_PH |
| data_int | recdev_fulladj |
| dvector | biasadj |
| data_matrix | init_F_parm_1 |
| dvector | init_F_LO |
| dvector | init_F_HI |
| dvector | init_F_RD |
| dvector | init_F_PR |
| dvector | init_F_PRtype |
| dvector | init_F_CV |
| ivector | init_F_PH |
| data_matrix | Q_setup |
| int | Q_Npar |
| imatrix | Q_setup_parms |
| data_matrix | Q_parm_1 |
| dvector | Q_parm_LO |
| dvector | Q_parm_HI |
| ivector | Q_parm_PH |
| ivector | seltype_Nparam |
| data_imatrix | seltype |
| int | N_selparm |
| data_matrix | selparm_1 |
| data_int | selparm_adjust_method |
| int | N_selparm_env |
| int | N_selparm_dev |
| int | N_selparm2 |
| int | parmN |
| int | blkparm |
| ivector | selparm_env |
| imatrix | time_vary |
| data_int | customenvsetup |
| data_matrix | selparm_env_1 |
| int | N_selparm_blk |
| imatrix | Block_Defs |
| data_int | customblocksetup |
| data_matrix | selparm_blk_1 |
| dvector | selparm_LO |
| dvector | selparm_HI |
| dvector | selparm_RD |
| dvector | selparm_PR |
| dvector | selparm_PRtype |
| dvector | selparm_CV |
| ivector | selparm_PH |
| ivector | selparm_dev_minyr |
| ivector | selparm_dev_maxyr |
| dvector | selparm_dev_stddev |
| data_number | selparm_dev_PH |
| data_matrix | var_adjust |
| data_number | DF_disc |
| data_number | DF_bodywt |
| data_number | max_lambda_phase |
| data_number | sd_offset |
| data_matrix | surv_lambda |
| data_matrix | disc_lambda |
| data_vector | mnwt_lambda |
| data_matrix | length_lambda |
| data_matrix | age_lambda |
| data_matrix | sizeage_lambda |
| data_vector | lambda_init_equ |
| data_vector | lambda_rec |
| data_vector | lambda_parmprior |
| data_vector | lambda_parm_dev |
| data_vector | CrashPen_lambda |
| data_number | max_harvest_rate |
| data_int | fim |
| double | max_phase |
| double | report_phase |
| data_number | SPR_target |
| data_int | N_forecast_yrs |
| data_int | N_forecast_yrs_std |
| data_number | fore_recr_lambda |
| data_number | fore_recr_biasadj1 |
| data_number | fore_recr_biasadj2 |
| data_number | H4010_top |
| data_number | H4010_bot |
| data_number | H4010_scale |
| data_int | Fore_Sel_yr1 |
| data_int | Fore_Sel_yr2 |
| int | did_MSY |
| data_int | Fore_Rel_Harvest |
| data_matrix | Input_ForeRate |
| data_number | fif |
| data_matrix | Input_ForeCatch |
| ofstream * | pad_report2 |
| int | z |
| int | L1 |
| int | L2 |
| int | A2 |
| int | a1 |
| int | f |
| int | g |
| int | gg |
| int | a |
| int | b |
| int | p |
| int | p2 |
| int | i |
| int | y |
| int | s |
| int | s2 |
| int | t |
| int | j |
| int | j1 |
| int | j2 |
| int | k |
| int | s_off |
| int | Fishon |
| double | lambda_catch |
Friends | |
| class | model_parameters |
| model_data::~model_data | ( | ) | [private] |
| model_data::model_data | ( | int | argc, | |
| char * | argv[] | |||
| ) | [private] |
friend class model_parameters [friend] |
int model_data::a [private] |
int model_data::a1 [private] |
int model_data::A2 [private] |
data_number model_data::AFIX [private] |
data_number model_data::AFIX2 [private] |
double model_data::age [private] |
d3_array model_data::age_age [private] |
dvector model_data::age_bins [private] |
data_vector model_data::age_bins1 [private] |
data_3array model_data::age_err [private] |
data_matrix model_data::age_lambda [private] |
data_matrix model_data::Age_Maturity [private] |
data_matrix model_data::Age_NatMort [private] |
ivector model_data::age_vector [private] |
data_matrix model_data::agedata [private] |
imatrix model_data::ageerr_type_a [private] |
imatrix model_data::ageerr_type_ms [private] |
dvector model_data::azero_G [private] |
dvector model_data::azero_seas [private] |
int model_data::b [private] |
dvector model_data::biasadj [private] |
dvector model_data::binwidth [private] |
int model_data::bio_yr [private] |
int model_data::birthseas [private] |
int model_data::blkparm [private] |
imatrix model_data::Block_Defs [private] |
imatrix model_data::Block_Defs_MG [private] |
data_imatrix model_data::Block_Design [private] |
data_number model_data::boundpush [private] |
ivector model_data::Bseas [private] |
data_int model_data::burn_intvl [private] |
double model_data::catch_ballpark [private] |
data_matrix model_data::catch_bioT [private] |
dmatrix model_data::catch_ret_obs [private] |
dvector model_data::catchunits [private] |
int model_data::CGD [private] |
data_vector model_data::CrashPen_lambda [private] |
init_adstring model_data::ctlfilename [private] |
data_int model_data::customblocksetup [private] |
data_int model_data::customblocksetup_MG [private] |
data_int model_data::customenvsetup [private] |
data_int model_data::customMGenvsetup [private] |
dmatrix model_data::cv_cr [private] |
data_int model_data::CV_depvar [private] |
int model_data::CV_depvar_a [private] |
int model_data::CV_depvar_b [private] |
dmatrix model_data::cv_disc [private] |
init_adstring model_data::datfilename [private] |
data_number model_data::DF_bodywt [private] |
data_number model_data::DF_disc [private] |
int model_data::did_MSY [private] |
data_matrix model_data::disc_lambda [private] |
data_int model_data::disc_type [private] |
data_matrix model_data::discdata [private] |
data_int model_data::Do_Forecast [private] |
data_int model_data::do_migration [private] |
data_int model_data::Do_MSY [private] |
int model_data::do_once [private] |
data_int model_data::Do_Rebuilder [private] |
data_int model_data::do_recr_dev [private] |
int model_data::doit [private] |
int model_data::done_run [private] |
int model_data::doreport3 [private] |
double model_data::dummy_datum [private] |
int model_data::dummy_phase [private] |
data_int model_data::endyr [private] |
dmatrix model_data::env_data_RD [private] |
data_matrix model_data::env_temp [private] |
int model_data::eq_yr [private] |
int model_data::f [private] |
data_number model_data::F_ballpark [private] |
data_int model_data::F_ballpark_yr [private] |
data_int model_data::F_Method [private] |
dvector model_data::femfrac [private] |
data_int model_data::fid [private] |
data_number model_data::fif [private] |
data_int model_data::fim [private] |
data_number model_data::final_conv [private] |
data_int model_data::First_Mature_Age [private] |
data_int model_data::fishery_on_off [private] |
int model_data::Fishon [private] |
data_ivector model_data::fleet_area [private] |
init_adstring model_data::fleetname [private] |
int model_data::floop [private] |
data_number model_data::fore_recr_biasadj1 [private] |
data_number model_data::fore_recr_biasadj2 [private] |
data_number model_data::fore_recr_lambda [private] |
data_int model_data::Fore_Rel_Harvest [private] |
data_int model_data::Fore_Sel_yr1 [private] |
data_int model_data::Fore_Sel_yr2 [private] |
data_number model_data::fracfemale [private] |
dvector model_data::func_conv [private] |
dvector model_data::func_eval [private] |
int model_data::g [private] |
imatrix model_data::gen_a [private] |
imatrix model_data::gen_l [private] |
imatrix model_data::gen_ms [private] |
data_int model_data::gender [private] |
int model_data::gg [private] |
int model_data::gmorph [private] |
ivector model_data::GP [private] |
int model_data::gp [private] |
ivector model_data::GP2 [private] |
int model_data::gp2 [private] |
data_number model_data::H4010_bot [private] |
data_number model_data::H4010_scale [private] |
data_number model_data::H4010_top [private] |
ivector model_data::have_catch [private] |
dmatrix model_data::have_data [private] |
d3_array model_data::header_a [private] |
d3_array model_data::header_l [private] |
d3_array model_data::header_ms [private] |
int model_data::i [private] |
data_matrix model_data::indexdata [private] |
dvector model_data::init_F_CV [private] |
dvector model_data::init_F_HI [private] |
dvector model_data::init_F_LO [private] |
data_matrix model_data::init_F_parm_1 [private] |
ivector model_data::init_F_PH [private] |
dvector model_data::init_F_PR [private] |
dvector model_data::init_F_PRtype [private] |
dvector model_data::init_F_RD [private] |
data_matrix model_data::Input_ForeCatch [private] |
data_matrix model_data::Input_ForeRate [private] |
int model_data::j [private] |
int model_data::j1 [private] |
int model_data::j2 [private] |
data_number model_data::jitter [private] |
int model_data::k [private] |
int model_data::k1 [private] |
int model_data::k2 [private] |
int model_data::k3 [private] |
int model_data::L1 [private] |
int model_data::L2 [private] |
double model_data::lambda_catch [private] |
data_vector model_data::lambda_init_equ [private] |
data_vector model_data::lambda_parm_dev [private] |
data_vector model_data::lambda_parmprior [private] |
data_vector model_data::lambda_rec [private] |
d3_array model_data::Lbin_filter [private] |
imatrix model_data::Lbin_hi [private] |
imatrix model_data::Lbin_lo [private] |
data_vector model_data::len_bins [private] |
dvector model_data::len_bins2 [private] |
dvector model_data::len_bins_m [private] |
dvector model_data::len_bins_m2 [private] |
dvector model_data::len_bins_sq [private] |
data_matrix model_data::lendata [private] |
data_matrix model_data::length_lambda [private] |
dmatrix model_data::Ln_obs_cr [private] |
dvector model_data::male_offset [private] |
data_int model_data::Maturity_Option [private] |
data_number model_data::max_harvest_rate [private] |
data_number model_data::max_lambda_phase [private] |
double model_data::max_phase [private] |
double model_data::maxL [private] |
int model_data::mccounter [private] |
ivector model_data::MG_active [private] |
data_int model_data::MG_adjust_method [private] |
int model_data::MGP_CGD [private] |
ivector model_data::mgp_type [private] |
data_matrix model_data::MGparm_1 [private] |
data_matrix model_data::MGparm_blk_1 [private] |
dvector model_data::MGparm_CV [private] |
data_int model_data::MGparm_def [private] |
ivector model_data::MGparm_dev_maxyr [private] |
ivector model_data::MGparm_dev_minyr [private] |
data_number model_data::MGparm_dev_PH [private] |
dvector model_data::MGparm_dev_stddev [private] |
ivector model_data::MGparm_env [private] |
data_matrix model_data::MGparm_env_1 [private] |
dvector model_data::MGparm_HI [private] |
dvector model_data::MGparm_LO [private] |
ivector model_data::MGparm_PH [private] |
dvector model_data::MGparm_PR [private] |
ivector model_data::MGparm_PRtype [private] |
dvector model_data::MGparm_RD [private] |
data_number model_data::min_comp [private] |
data_number model_data::min_tail [private] |
double model_data::minL [private] |
double model_data::minL2 [private] |
imatrix model_data::mkt_a [private] |
imatrix model_data::mkt_l [private] |
imatrix model_data::mkt_ms [private] |
data_vector model_data::mnwt_lambda [private] |
data_matrix model_data::mnwtdata [private] |
data_4array model_data::move_pattern [private] |
data_int model_data::n_abins [private] |
int model_data::n_abins1 [private] |
int model_data::n_abins2 [private] |
data_int model_data::N_ageerr [private] |
data_int model_data::N_Block_Designs [private] |
data_int model_data::N_envdata [private] |
data_int model_data::N_envvar [private] |
data_int model_data::N_forecast_yrs [private] |
data_int model_data::N_forecast_yrs_std [private] |
data_int model_data::N_GP [private] |
data_int model_data::N_GP2 [private] |
int model_data::N_MGparm [private] |
int model_data::N_MGparm2 [private] |
int model_data::N_MGparm_blk [private] |
int model_data::N_MGparm_dev [private] |
int model_data::N_MGparm_env [private] |
int model_data::N_move_parms [private] |
data_int model_data::N_nudata [private] |
int model_data::N_prof_var [private] |
int model_data::N_selparm [private] |
int model_data::N_selparm2 [private] |
int model_data::N_selparm_blk [private] |
int model_data::N_selparm_dev [private] |
int model_data::N_selparm_env [private] |
ivector model_data::N_supyr_a [private] |
ivector model_data::N_supyr_cr [private] |
ivector model_data::N_supyr_disc [private] |
ivector model_data::N_supyr_l [private] |
ivector model_data::N_supyr_ms [private] |
data_int model_data::nages [private] |
data_number model_data::natM_amax [private] |
data_number model_data::natM_amin [private] |
data_ivector model_data::Nblk [private] |
ivector model_data::Nblk2 [private] |
data_int model_data::Nfleet [private] |
double model_data::NilNumbers [private] |
data_int model_data::nlength [private] |
int model_data::nlength1 [private] |
int model_data::nlength2 [private] |
data_int model_data::nobs [private] |
data_int model_data::nobs_disc [private] |
data_int model_data::nobs_mnwt [private] |
data_int model_data::nobs_ms [private] |
data_int model_data::nobsa [private] |
data_int model_data::nobsl [private] |
dmatrix model_data::nsamp_a [private] |
dmatrix model_data::nsamp_a_read [private] |
dmatrix model_data::nsamp_l [private] |
dmatrix model_data::nsamp_l_read [private] |
data_int model_data::nseas [private] |
data_int model_data::Nsurve [private] |
int model_data::Ntypes [private] |
ivector model_data::nyr_a [private] |
ivector model_data::nyr_cr [private] |
ivector model_data::nyr_disc [private] |
ivector model_data::nyr_l [private] |
ivector model_data::nyr_ms [private] |
d3_array model_data::obs_a [private] |
dmatrix model_data::obs_cr [private] |
dmatrix model_data::obs_disc [private] |
data_vector model_data::obs_equ_catch [private] |
d3_array model_data::obs_l [private] |
d3_array model_data::obs_ms [private] |
d3_array model_data::obs_ms_n [private] |
d3_array model_data::obs_ms_n_read [private] |
int model_data::p [private] |
int model_data::p2 [private] |
ofstream* model_data::pad_report2 [private] |
int model_data::parmN [private] |
imatrix model_data::pfleetname [private] |
double model_data::pi [private] |
data_int model_data::pop [private] |
data_vector model_data::prof_var [private] |
int model_data::prof_var_cnt [private] |
int model_data::Q_Npar [private] |
data_matrix model_data::Q_parm_1 [private] |
dvector model_data::Q_parm_HI [private] |
dvector model_data::Q_parm_LO [private] |
ivector model_data::Q_parm_PH [private] |
data_matrix model_data::Q_setup [private] |
imatrix model_data::Q_setup_parms [private] |
dvector model_data::r_ages [private] |
data_int model_data::readparfile [private] |
data_int model_data::Rebuild_Ydecl [private] |
data_int model_data::Rebuild_Yinit [private] |
data_int model_data::recdev_end [private] |
data_int model_data::recdev_fulladj [private] |
data_number model_data::recdev_HI [private] |
data_number model_data::recdev_LO [private] |
data_int model_data::recdev_PH [private] |
data_int model_data::recdev_start [private] |
data_int model_data::recr_dist_inx [private] |
data_3array model_data::recr_dist_pattern [private] |
imatrix model_data::recr_dist_pattern_2 [private] |
double model_data::report_phase [private] |
data_int model_data::reportdetail [private] |
data_int model_data::retro_yr [private] |
data_int model_data::rundetail [private] |
int model_data::runnumber [private] |
int model_data::s [private] |
int model_data::s2 [private] |
int model_data::s_off [private] |
int model_data::save_for_report [private] |
int model_data::save_gparm [private] |
int model_data::save_gparm_print [private] |
data_number model_data::SD_add_to_LAA [private] |
double model_data::sd_betweenmorph [private] |
dmatrix model_data::sd_disc [private] |
data_number model_data::sd_offset [private] |
data_number model_data::sd_ratio [private] |
double model_data::sd_withinmorph [private] |
data_vector model_data::seasdur [private] |
data_matrix model_data::selparm_1 [private] |
data_int model_data::selparm_adjust_method [private] |
data_matrix model_data::selparm_blk_1 [private] |
dvector model_data::selparm_CV [private] |
ivector model_data::selparm_dev_maxyr [private] |
ivector model_data::selparm_dev_minyr [private] |
data_number model_data::selparm_dev_PH [private] |
dvector model_data::selparm_dev_stddev [private] |
ivector model_data::selparm_env [private] |
data_matrix model_data::selparm_env_1 [private] |
dvector model_data::selparm_HI [private] |
dvector model_data::selparm_LO [private] |
ivector model_data::selparm_PH [private] |
dvector model_data::selparm_PR [private] |
dvector model_data::selparm_PRtype [private] |
dvector model_data::selparm_RD [private] |
data_imatrix model_data::seltype [private] |
ivector model_data::seltype_Nparam [private] |
ivector model_data::shadow [private] |
int model_data::show_warning [private] |
data_matrix model_data::sizeage_lambda [private] |
data_matrix model_data::sizeagedata [private] |
data_int model_data::Smry_Age [private] |
data_int model_data::spawn_seas [private] |
data_int model_data::Spb_sdrep_maxyr [private] |
data_int model_data::Spb_sdrep_minyr [private] |
data_number model_data::SPR_target [private] |
data_int model_data::SR_env_link [private] |
int model_data::SR_env_target [private] |
data_int model_data::SR_env_target_RD [private] |
data_int model_data::SR_fxn [private] |
data_matrix model_data::SR_parm_1 [private] |
dvector model_data::SRvec_HI [private] |
dvector model_data::SRvec_LO [private] |
ivector model_data::SRvec_PH [private] |
data_int model_data::styr [private] |
data_vector model_data::submorphdist [private] |
double model_data::sumseas [private] |
imatrix model_data::supyr_a1 [private] |
imatrix model_data::supyr_a2 [private] |
imatrix model_data::supyr_cr1 [private] |
imatrix model_data::supyr_cr2 [private] |
imatrix model_data::supyr_disc1 [private] |
imatrix model_data::supyr_disc2 [private] |
imatrix model_data::supyr_l1 [private] |
imatrix model_data::supyr_l2 [private] |
imatrix model_data::supyr_ms1 [private] |
imatrix model_data::supyr_ms2 [private] |
data_matrix model_data::surv_lambda [private] |
data_vector model_data::surveytime [private] |
ivector model_data::sx [private] |
int model_data::t [private] |
d3_array model_data::tails_a [private] |
d3_array model_data::tails_l [private] |
ivector model_data::tails_w [private] |
double model_data::temp [private] |
Reimplemented in model_parameters.
data_int model_data::thin_intvl [private] |
imatrix model_data::time_vary [private] |
ivector model_data::time_vary_MG [private] |
int model_data::TimeMax [private] |
int model_data::TimeMax_Fore [private] |
int model_data::TimeMax_Fore_std [private] |
int model_data::tloop [private] |
data_int model_data::Turn_off_phase [private] |
imatrix model_data::use_Lbin_filter [private] |
ivector model_data::use_morph [private] |
imatrix model_data::use_ms [private] |
data_matrix model_data::var_adjust [private] |
init_adstring model_data::version_info [private] |
dmatrix model_data::vul_bio [private] |
int model_data::y [private] |
ivector model_data::years [private] |
imatrix model_data::yr_a [private] |
d3_array model_data::yr_a2 [private] |
imatrix model_data::yr_a_y [private] |
imatrix model_data::yr_cr [private] |
dmatrix model_data::yr_cr2 [private] |
imatrix model_data::yr_cr_y [private] |
imatrix model_data::yr_disc [private] |
dmatrix model_data::yr_disc2 [private] |
imatrix model_data::yr_disc_y [private] |
imatrix model_data::yr_l [private] |
d3_array model_data::yr_l2 [private] |
imatrix model_data::yr_l_y [private] |
d3_array model_data::yr_mnwt2 [private] |
imatrix model_data::yr_ms [private] |
d3_array model_data::yr_ms2 [private] |
imatrix model_data::yr_ms_y [private] |
int model_data::z [private] |
1.4.7